Data acquisition and data processing for Axio Scan Slide Scanner

hands-on
software
imaging
live training

Data acquisition and data processing for Axio Scan Slide Scanner

Target Audience:
VIB PhD student
VIB postdoc
VIB staff scientist
VIB group leader or expert
Location:

Meeting room L4 at the VIB UGent Center for Medical Biotechnology

General context

This one-day workshop is aimed at helping people understand the workflow from data acquisition and processing to analysis and scripting. We strongly encourage all current AxioScan users to attend. If anyone has an image that would be of interest for a demonstrations, please contact the organizers at the lasted 10 days prior to the workshop.

Learning outcomes
    • Image processing for analysis and publications
    • Quantification of diseased/damaged tissue in several modalities, both in brightfield and fluorescence
    • Basics of scripting

Trainers

Amanda Gonçalves
VIB Bioimaging Core Ghent, BE

Amanda is a Microscopy Expert at the VIB Bioimaging Core-Gent, where since 2011, she has gained expertise in large sample imaging and quantification, from slide scanner to light sheet. She also has over 15 years of experience teaching science, both practical and theoretical, on the graduate and post graduate levels.

Benjamin Pavie
VIB Bioimaging Core, BE

Practical info

Location & Venue

14 June 2022

Ghent - VIB/UGent FSVM II

Technologiepark 75
9052 Zwijnaarde
Belgium

Public transport

14 June 2022

Ghent - VIB/UGent FSVM II
Public transport

From Ghent Sint-Pieters station, you can take a bus to Technologiepark. Please check Routeplanner De Lijn for schedules.

Bike

14 June 2022

Ghent - VIB/UGent FSVM II
Bike

Looking for a custom cycling route? Try the online cycling route planner to easily and quickly identify the fastest, safest and/or most scenic route to any destination in Ghent.
Cycling route planner
 

Shared bicycles:

Several providers are active in the area.
Take a look at their platforms:
- Indigo Weel Pro app
- Bluebike
- DOTT
- BOLT eBikes
- Donkey Republic

There are also some public bicycle pumps at the park.

Route description

14 June 2022

Ghent - VIB/UGent FSVM II
Parking

Route description

There is only one entrance to Technologiepark. At the entrance, please take a ticket  - Parking is only allowed in regular parking spots (for instance in front of the building) and in the parking tower. Parking alongside the roads or in other places where there is no regular parking is prohibited.

Venue contact

14 June 2022

Ghent - VIB/UGent FSVM II