Gentle hands-on introduction to Python programming

programming
online
ELIXIR
live training

Gentle hands-on introduction to Python programming

Target Audience:
VIB PhD student
VIB postdoc
VIB staff scientist
VIB group leader or expert
VIB technical support
Location:

 

Ghent

Building 75 (CMB building),
4th floor - room: L4

 

This is a Hybrid course

Duration:

3 days

General context

This course gently introduces programming to new programmers. There are plenty of opportunuties to apply and practice what you learn, and ask questions in a safe place. Furthermore, surprise yourself by building a substantial project over the 3 course weeks. We use the popular Python programming language to prepare you for real-world research application of what you learn.

 

This will be a hybrid session, and for the best learning experience we recommend to participate in person.

IMPORTANTE: Changes regarding what type of session to attend will not be allowed!

Learning outcomes

After completing this course, you will be able to:

  • Understand some fundamental programming concepts
  • Understand Python programs written by your colleagues
  • Make useful changes to existing Python programs
  • Write new, useful Python programs
  • Take more advanced Python courses
Required skills

This course is aimed at people with no programming skills or experience. Those who want to learn Python but have experience with other languages are welcome but you may find the course slow going.

If you’re already familiar with Python and want to improve your skills in a particular area please register for a more specialized course such as the.data analysis, the machine learning or the deep learning training.

Trainers

James Collier
VIB Metabolomics Core Leuven, BE

I am a software engineer with over 10 years of professional experience on systems ranging from tiny embedded medical microchips, through to web applications and high-performance supercomputers. I grew up in a small town in rural Australia then completed a PhD at Monash University applying information compression to the protein structural alignment problem. Now I live in the Netherlands with my lovely wife and three children. Currently, I work for VIB Technologies building web applications. You can find out more about me here: https://james.thecolliers.xyz/

Contact James Collier :
Nina Buchina
TOPIC Embedded Systems, NL

Nina Buchina is a software engineer currently working in a field of robotics in the Netherlands. She completed a MSc program in Mathematics and Computer Science at the Eindhoven Technical University. Nina lives near Eindhoven and raises a beautiful cat.

Bruna Piereck
VIB Training & Conferences - Trainer picture - Bruna Piereck
VIB Training & Conferences / ELIXIR, BE

Bruna Piereck is a bioinformatics trainer at VIB and ELIXIR-BE training coordinator deputy. She obtained a Master and PhD degree in Molecular Genetics, with a focus on Bioinformatics from the Federal University of Pernambuco, Brazil, in 2019. During her PhD, she had the chance to collaborate with the university of Luxembourg and the McGill university in Quebec Canada for a short time. Ever since she has been involved with teaching and research and Since March 2022, she joined VIB with the mission of teaching and assist other trainers in a variety of topics.

Contact Bruna Piereck :
Tatiana Woller
VIB Bioimaging core Leuven and Datacore, BE

Tatiana Woller is a data expert at the BioImaging Core Leuven and the VIB Data Core. 

Her task focuses on exploring and finding solutions for data management of biological images.

 

Contact Tatiana Woller :
Alexander Botzki
VIB Training & Conferences / ELIXIR, BE

Alexander Botzki at the Flemish Institute of Biotechnology, Belgium has with his group the mission of providing technology training in domains of VIB Technologies, Bioinformatics & AI, Software Development, and Research Data Management. Between 2014 and 2022, he was head of the VIB Bioinformatics Core. From September 2009 to July 2014, he was responsible for the roll-out of E-Notebook (electronic lab notebook) to VIB's researchers within 75 research groups.

Before joining VIB, Alexander worked on various computational biology projects for Algonomics (bought by Lonza, 2008-2009) and DevGen (now Syngenta, from 2006-2008). During Alexander's PostDoc at Sanofi Aventis in Strasbourg, he executed various virtual screening campaigns on the compound selection of the merged enterprise. He received his doctoral degree with the group of Prof. Dr. Armin Buschauer (University of Regensburg, Germany) on 'Structure-based design of hyaluronidase inhibitors'.

Contact Alexander Botzki :

Program

-
  • Introduction to your instructors and fellow students
  • Learning environment setup
  • What is programming and computation?
  • Introduction to Python
  • Explore available projects
-
  • Review of the previous week
  • Organizing and operating on data
  • Reading and Writing data to files
-
  • Review of previous week
  • Cool Python features

Practical info

Location & Venue

12 April 2023 - 26 April 2023

Ghent - VIB/UGent FSVM II

Technologiepark 75
9052 Zwijnaarde
Belgium

Public transport

12 April 2023 - 26 April 2023

Ghent - VIB/UGent FSVM II
Public transport

From Ghent Sint-Pieters station, you can take a bus to Technologiepark. Please check Routeplanner De Lijn for schedules.

Bike

12 April 2023 - 26 April 2023

Ghent - VIB/UGent FSVM II
Bike

Looking for a custom cycling route? Try the online cycling route planner to easily and quickly identify the fastest, safest and/or most scenic route to any destination in Ghent.
Cycling route planner
 

Shared bicycles:

Several providers are active in the area.
Take a look at their platforms:
- Indigo Weel Pro app
- Bluebike
- DOTT
- BOLT eBikes
- Donkey Republic

There are also some public bicycle pumps at the park.

Route description

12 April 2023 - 26 April 2023

Ghent - VIB/UGent FSVM II
Parking

Route description

There is only one entrance to Technologiepark. At the entrance, please take a ticket  - Parking is only allowed in regular parking spots (for instance in front of the building) and in the parking tower. Parking alongside the roads or in other places where there is no regular parking is prohibited.

Venue contact

12 April 2023 - 26 April 2023

Ghent - VIB/UGent FSVM II
Extra information

Info for trainer
Elixir code: 7550