Proteomics bioinformatics
Proteomics bioinformatics
14 July 2025, 10h00 - 19h30
15 July 2025, 08h15 - 19h15
16 July 2025, 08h15 - 18h30
17 July 2025, 08h15 - 19h00
18 July 2025, 08h15 - 16h00
General context
This course provides hands-on training in the basics of mass spectrometry (MS) and proteomics bioinformatics. You will receive training on how to use search engines and post-processing software, quantitative approaches, MS data repositories, the use of public databases for protein analysis, annotation of subsequent protein lists, and incorporation of information from molecular interaction and pathway databases.
The practical elements of the course will take raw data from a proteomics experiment and analyse it. You will be able to go from MS aspectra to identifying and quantifying peptides, and finally obtaining lists of protein identifiers that can be analysed further using a wide range of resources. The final aim is to provide you with the practical bioinformatics knowledge you need to go back to the lab and process your data when collected.
After completing the course, you will be able to:
- Use and summarize bioinformatics tools to analyse shotgun proteomics data, involving identification and quantification approaches
- Browse, search, submit, retrieve, and re-use proteomics data from widely used public proteomics data repositories
- Evaluate the strengths and weaknesses of several experimental and bioinformatics analysis approaches
- Use tools to perform annotation of lists of proteins
Pre-recorded material may be provided before the course starts that you will need to watch, read, or work through to gain the most out of the actual training event.
The course is aimed at research scientists with a minimum of a degree in a scientific discipline, including industrial, laboratory, and clinical staff, and specialists in related fields. Basic knowledge of mass spectrometry experiments for proteomics would be an advantage.
Practical info
14 July 2025 - 18 July 2025
EMBL's European Bioinformatics Institute (EMBL-EBI)
Campus, EMBL-EBI Main Building, Wellcome Genome, Hinxton , United Kingdom
WJ Hinxton, Saffron Walden, UK
CB10 1SD
United Kingdom
14 July 2025 - 18 July 2025
EMBL's European Bioinformatics Institute (EMBL-EBI)
No public transport information has been provided for this location.
14 July 2025 - 18 July 2025
EMBL's European Bioinformatics Institute (EMBL-EBI)
14 July 2025 - 18 July 2025
EMBL's European Bioinformatics Institute (EMBL-EBI)
No parking information has been provided for this location.
14 July 2025 - 18 July 2025
EMBL's European Bioinformatics Institute (EMBL-EBI)
No contact information for this location has been provided.