Single cell transcriptomics summer school

The first day of the summer school will provide an introduction to the field, discussing both the capabilities but also the pitfalls of the technology. The added value of single cell data to spatial omics experiments will be highlighted. This day is free and open to all scientists. Participants are encouraged to join in person (especially those from Belgium) but the talks will be streamed to reach a broad audience. 

In the next three days we go through the whole analysis pipeline. We will teach you how to:

• get the data into R 
• do proper quality control and filtering on gene level and cell level
• cluster the cells and create UMAP plots
• find potential markers for a subset of cells or genes that are differentially expressed between conditions
• further downstream analyses will be catered according to the participants needs 

There will be room to start the analysis of your own data under the supervision of experts.

Because this part of the summer school is very hands on, seats are paying and limited. If you want to join this part of the summer school, you have to fill in the form below. From the submissions we will select 40 participants to join the full summer school.