Introduction to Git & GitHub - Brasil

hands-on
basic bioinformatics
ELIXIR
live training

Introduction to Git & GitHub - Brasil

Target Audience:
All scientists
Location:

Recife - Brasil
Instituto de Ciências Biológicas da UPE (Campus Santo Amaro)

 

 

Duration:

2 days

General context

Arriving: 
Rua Arnóbio Marquês, 310 - Santo Amaro - PE, 50100-130
Laboratório de Informática - Centro de Pesquisa do ICB, térreo.

This course will happen in Portuguese (BR), but the information page in English.

This workshop will take you through the basic use of Git and GitHub. Git is a free and open source distributed version-control system designed to maintain code, track changes, recover old versions and collaborate with other developers. 

Objectives

Get you started with Git from zero (note that if you already use Git, this workshop will be too basic for you). We'll explore Git on the command-line and its interaction with GitHub. 

  • Introduction, set-up & configurations
  • Working locally: Create a repository, clone, edit, staging commits, commit & push
  • Working with your history & logs
  • Working in a project: Branching & pull requests
  • Collaborate with other people in your project

During the workshop we also briefly discuss how you can setup a collaboration project.  

Event intended for

This course is intended for researchers who are learning or using a programming language (R, Python, ...) and might have an existing project with code or text files that need track of changes. If you intend to make your code collaborative, bonus points for you!

Required skills

IMPORTANT! Some basic knowledge of the command-line is advised for this course (e.g. this tutorial). 

Trainers

Bruna Piereck
VIB / ELIXIR-BE

Bruna Piereck is a bioinformatics trainer coordinator working at VIB Technology Training and ELIXIR Belgium. She obtained a PhD in Molecular Genetics, with a focus on Bioinformatics from the Federal University of Pernambuco, Brazil, in September 2019. During her PhD, she had the chance to collaborate with the university of Luxembourg and McGill university in Quebec for a short time. Ever since she has been involved with teaching  and Since March 2022, she joined the Technology Training team at VIB.

Contact Bruna Piereck :

Program

Configurations & Introduction
-
Coffe Break
-
Routine usage part 1 (status-stage-commit)
-
Lunch
-
History & Versions
-
From Git to GitHub
-
Coffe Break
-
Collaborating in GitHub
-
Recap from 1st day
-
Experimenting Risk Free: What are Branchs in Git & GitHub
-
Coffe Break
-
Experimenting Risk Free: Working with Branchs
-
Lunch
-
Solving Conflicts
-
Coffee Break
-
Changing an old version - Another way of Branching
-
Coffee Break
-
Forking
-

Practical info

Extra information

Info for trainer
Elixir code: (to be registered)